BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008C02SP1|AL425823
(797 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1762 1577 0.0
>3x_Contig1762
Length = 22098
Score = 1577 bits (795), Expect = 0.0
Identities = 796/797 (99%)
Strand = Plus / Minus
Query: 1 aaaccagaaaagaagaaaaagaagggatttttctccaagttaaagaaaatattcaactaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3843 aaaccagaaaagaagaaaaagaagggatttttctccaagttaaagaaaatattcaactaa 3784
Query: 61 ttctaactttgcgccaccttttttataaaggcccatcaaggcaagggaaagcttgctgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3783 ttctaactttgcgccaccttttttataaaggcccatcaaggcaagggaaagcttgctgaa 3724
Query: 121 tgttatttctattagataaatgacattccgaactgcccaagcaacgactttcaaaacagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3723 tgttatttctattagataaatgacattccgaactgcccaagcaacgactttcaaaacagg 3664
Query: 181 aacgcaagttctttacttataccaaaagaagaagtaaaaaaccccccaaaaaaaccggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3663 aacgcaagttctttacttataccaaaagaagaagtaaaaaaccccccaaaaaaaccggaa 3604
Query: 241 ctgccaccgatcttaaggtttgactgatctgttatttcagctcatacccgtccagcaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3603 ctgccaccgatcttaaggtttgactgatctgttatttcagctcatacccgtccagcaatt 3544
Query: 301 gtaatgaatacttgtgaagtttaattttatttttcctctttttatatatataattttgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3543 gtaatgaatacttgtgaagtttaattttatttttcctctttttatatatataattttgta 3484
Query: 361 atacaatatgctattgtcactaataattaacttaattttaataccataaacttactgctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3483 atacaatatgctattgtcactaataattaacttaattttaataccataaacttactgctt 3424
Query: 421 ctaagaatgaaacattaacattctacgaggtgcaatgaagtgttcatccaattactatcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3423 ctaagaatgaaacattaacattctacgaggtgcaatgaagtgttcatccaattactatcc 3364
Query: 481 aaaagaaactgtcacctgtctgttatatttttcataaactcattgatatttctgtccagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3363 aaaagaaactgtcacctgtctgttatatttttcataaactcattgatatttctgtccagt 3304
Query: 541 ctcattattgaraagcaattaaacgttagttcagaaaattttacattcattgagatgaga 600
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3303 ctcattattgaaaagcaattaaacgttagttcagaaaattttacattcattgagatgaga 3244
Query: 601 tgagatgagatgagcttgaaatggtataaagatacttgcagactcctttacaaagtagat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3243 tgagatgagatgagcttgaaatggtataaagatacttgcagactcctttacaaagtagat 3184
Query: 661 ccttcatttctactgagattgttgaacaagaactcagataagcgaaagtaatcgacatgt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3183 ccttcatttctactgagattgttgaacaagaactcagataagcgaaagtaatcgacatgt 3124
Query: 721 cggattccagcaaagaggttaaaaaagtggatgatgctgtaagtcaagtcttaaaggacc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3123 cggattccagcaaagaggttaaaaaagtggatgatgctgtaagtcaagtcttaaaggacc 3064
Query: 781 ccaccaagaagagaaag 797
|||||||||||||||||
Sbjct: 3063 ccaccaagaagagaaag 3047
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9559
Number of Sequences: 1807
Number of extensions: 9559
Number of successful extensions: 583
Number of sequences better than 1.0e-20: 1
length of query: 797
length of database: 10,358,551
effective HSP length: 16
effective length of query: 781
effective length of database: 10,329,639
effective search space: 8067448059
effective search space used: 8067448059
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)